rs6210228 SNP Detail

Summary

• ID
  rs6210228
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:41494317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGCAGCGT TTCTTCAAAT
  GCTCTTCATA TACTTAGATA TACCTGAGGA TCTGGGCAAA ACAGAGGCAT GAGAAGGAGT
  TGATCTTAGA AGGCTTCACC ACCAGAGCCT GGATCCCCAC CCCACAAGGG ACATGACTGA
  ACTCTGGACA TCTCTCCTAG ACTGCTGTGT GGGTTGGACA AGATCAGACA CTTGAGTCTG
  Y
  GGGTCATCCT TCAGAGATTC TAACAGTGGT ATGTGGCTGA TGAGGTCTCA TGTGGAGGCT
  GTTGCTGGAG TCTTTGAGTC CAGGAATCCT AACAAACCTG ACTCCAAAAC AGAGAAGTGA
  AAAACAGGAA AGGAACTTTA ATCAGCAGAA CTATACCAGG AAGAGAAGGG GGATGATGCT
  GTCAGCCCTG GCCTTGGAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8615891	WI_WGS_4_41260974	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6210228					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:41494317 () rs orientation: forward

Symbol	Name	Function Class
Myorg	myogenesis regulating glycosidase (putative)	1287 bp downstream