rs6211165 SNP Detail

Summary

• ID
  rs6211165
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:108133878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         gtgtggtggt
  acacatctgt gatcttagta cttgggagct acaagcaaga agattagaag ttgaaggtca
  ctctccatta tatagcaagt ctggtcatcc aacagtgagt ttgaggccan ccaaagagcc
  tgactcattc attcatagac agacaaactg acaagataga cagactgaca gacagacaga
  cagacagaca cacacacaca cacacacaca caGAGGAATG TAAATCCGTA GTAGGGCACG
  M
  ATAAGAACTG ATTCTACAAA GTTACTGTCT GCCCTCCACA TGTGTCATGC ACATGCATGC
  TCTCAGAAAC ACACATTATA CACACAAATT TTAAAAGCAT ACATACATAT ATTTTACATA
  CACataaaaa tttaaattaa aataCCAGGC ATGTGCTAAc agtactagaa gagcaaaggc
  agaaggatca cttccagttc aagcccatcc aggcctacac agtgagttcc agatgagcca
  ggtctaGAAT                                                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8616831	WI_WGS_9_109123384	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6211165					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:108133878 () rs orientation: forward

Symbol	Name	Function Class
Dag1	dystroglycan 1	within coordinates