rs6212181 SNP Detail

Summary

• ID
  rs6212181
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128660950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAATGGGC ACCACAAAAT
  TACCTTGTAG CCCTGAGGAG TCCATAGACC TCTGGTTAAG AACCTATATA AATTCTGGCT
  TTGAAGACAG TGTTAGACTC TAGTGTTGAC CTTGGCTTAA TAATCTGACT TTTTGGATTG
  ACTTAGAGTT TCTATTTTAT TTCATTTATC TTTGAGACAG GAACTTTCTA TATAGTTCTT
  Y
  CCAACCTTGA ACTCTAAGGC TGACTCAGAA TTCACTAAGA TCTGTCTGTC TCTCTCAGTG
  CTTGGTTTAA AGGCAAGTGC CACCTCTCCT GGCCAATTTT GGGTTTTTAA TGCCTTAAAA
  AAACACTCTC GACAGGCGTG GTGGCGCACA CCTTTAATCC CAGCACTGGG GAGGCAGAGG
  CAGGCGGATT TCTGAGTTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8617847	WI_WGS_10_129493157	WI	MOUSE	f	SNP	T	C
ss323536226	CHEV_10_128262137	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6212181					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128660950 () rs orientation: forward

Symbol	Name	Function Class
Rr441336	regulatory region 441336	1762 bp distal
Sarnp	SAP domain containing ribonucleoprotein	within coordinates