rs6216013 SNP Detail

Summary

• ID
  rs6216013
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172696695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTGACAGAT GCCAGCTATT
  TGAGATAGAA TTGGTTGGAT CCAGGGGCAG CCTGTGGGTG CAGTCTTTAC CCTCACGGAA
  CTCCAAGCAC TGCATAAAAT TCTTCTACTT AGGATCTCGT GTGGCCCTGA ATGGCTTTGA
  ACATGCACTG CAGCTGACGA TGCCTTGAAC TTCTCATCCT CCTGCCTCTG TCTTCCAGAT
  R
  CCGGGCTGCA GCTTAAAGGT CCTAGTGAGG TCTCAACATT CTCAATGGCT TCTCAGCAAA
  AGGCCCCAAG CTCCCATGGT GCATCAGGCT CTGCCTTCAG CGGTGCTCTT CATTCAGCCC
  AGCTGCCTCT TCGGTTTTTG AGAATAAACC TGGGGAAGTT AATACGCAGT ACTGGATCGG
  CTGGAGAGTC TGGATGCGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8621689	WI_WGS_2_174083700	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6216013					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172696695 () rs orientation: forward

Symbol	Name	Function Class
Gm36254	predicted gene, 36254	within coordinates
Rr571755	regulatory region 571755	546 bp distal
Rr571756	regulatory region 571756	348 bp distal
Rr571757	regulatory region 571757	1351 bp proximal