rs6217943 SNP Detail

Summary

• ID
  rs6217943
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4948563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTAACCT TGAACTTGGG
  TACCTGCCTG TATTTGTACC TGCCTATCTT TGTATCTTTC TGGCAAGCTG GCTCATAGTG
  TTGTTACCTG TTTCTTTAGA TTCCTGAAGC CCCTCATAAT TCACATTGCA TCCTTATATT
  TTTGAATAGT TGAGAAATTA TATACCCTTG AATTCGTGTT TTTAGAATTT TCTTTTCCAC
  M
  GCCTTAAGGG CTGTCCTGAA GGCCCCAGCA TTTAACATTT TGCTAGAACA TTAGCCACAC
  CTTTGACTCC CAGTTTCTTA TTACCTTAAC AAGAGTATAT TCCTCAGAGG AATGTGAAAC
  ACATTATTGT ACAAACAAGC CTTACACCCA ATGTAGCCAT CCTCATTCAT ATCTGGGCCC
  TGTCCCAGGG GCAGGAACCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8623619	WI_WGS_12_4788776	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6217943					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4948563 () rs orientation: forward

Symbol	Name	Function Class
Rr386810	regulatory region 386810	within coordinates
Ubxn2a	UBX domain protein 2A	within coordinates