rs6217944 SNP Detail

Summary

• ID
  rs6217944
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4948564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTAACCTT GAACTTGGGT
  ACCTGCCTGT ATTTGTACCT GCCTATCTTT GTATCTTTCT GGCAAGCTGG CTCATAGTGT
  TGTTACCTGT TTCTTTAGAT TCCTGAAGCC CCTCATAATT CACATTGCAT CCTTATATTT
  TTGAATAGTT GAGAAATTAT ATACCCTTGA ATTCGTGTTT TTAGAATTTT CTTTTCCACC
  R
  CCTTAAGGGC TGTCCTGAAG GCCCCAGCAT TTAACATTTT GCTAGAACAT TAGCCACACC
  TTTGACTCCC AGTTTCTTAT TACCTTAACA AGAGTATATT CCTCAGAGGA ATGTGAAACA
  CATTATTGTA CAAACAAGCC TTACACCCAA TGTAGCCATC CTCATTCATA TCTGGGCCCT
  GTCCCAGGGG CAGGAACCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8623620	WI_WGS_12_4788777	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6217944					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4948564 () rs orientation: forward

Symbol	Name	Function Class
Rr386810	regulatory region 386810	within coordinates
Ubxn2a	UBX domain protein 2A	within coordinates