TGTGC ACATGTGCAT GTGGGTGTGG W ATATGCATAG TTCCATGTAA AGCCA W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C3H/HeJ |
C57BL/6J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss8624946 | WI_WGS_12_12625709 | WI | MOUSE | f | SNP | A | T | ||
ss323899597 | CHEV_12_12539682 | CHEVERUD | SCREENING_POP | f | SNP | T | A | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | C3H/HeJ |
C57BL/6J |
LG/J |
SM/J |
||||
rs6219263 | SNP | A | T | T | A |
Location: Chr12:12582877 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr266588 | regulatory region 266588 | 1078 bp distal | ||||||
Rr266589 | regulatory region 266589 | 1725 bp proximal | ||||||
Rr386869 | regulatory region 386869 | 1252 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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