rs6219263 SNP Detail

Summary

• ID
  rs6219263
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:12582877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGC ACATGTGCAT GTGGGTGTGG
  W
  ATATGCATAG TTCCATGTAA AGCCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
ss8624946	WI_WGS_12_12625709	WI	MOUSE	f	SNP	A	T
ss323899597	CHEV_12_12539682	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J	LG/J	SM/J
rs6219263					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:12582877 () rs orientation: forward

Symbol	Name	Function Class
Rr266588	regulatory region 266588	1078 bp distal
Rr266589	regulatory region 266589	1725 bp proximal
Rr386869	regulatory region 386869	1252 bp downstream