rs6222267 SNP Detail

Summary

• ID
  rs6222267
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:36529465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACACAAGG AACTTCCTTG
  ACTGATCTAA GACATGGAGG GAAAATGAAA AATTTCCAAG TGTTCTGAGA TCATGCATGG
  GATGCTTAGG TTGAAGTTGA GATACCAGTA TGGTATAGGG GTCATTTTAT CCAGTATAAG
  ATGAATAATG GAAGAGTGAG CACATAGATT GATAAACAGT GCTATTATGG GAAGAACTCA
  S
  AGCAGCTTGA AAACTGATAC TGGTACTCTA TATTGTTGAC ACAGATGCAC ACACCTAATG
  CTCTGAATGC CTGCATATCC TGCTTTCGGT AGTTCTACAG ATTCTGGTAT CCCACAGATC
  CATTGTAGCT CCATGGGAAC CACCATCTGG ATTTGATTCA TAGGAAGACA GCATTGGGGA
  AATACACTCA AGAAAGTTTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8627967	WI_WGS_2_37068007	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6222267					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:36529465 () rs orientation: forward

Symbol	Name	Function Class
Or1j16	olfactory receptor family 1 subfamily J member 16	588 bp upstream