rs6224086 SNP Detail

Summary

• ID
  rs6224086
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:41494545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         CAAGATCAGA
  CACTTGAGTC TGNGGGTCAT CCTTCAGAGA TTCTAACAGT GGTANGTGGC TGATGAGGTC
  TCATGTGGAG GCTGTTGCTG GAGTCTTTGA GTCCAGGAAT CCTAACAAAC CTGACTCCAA
  AACAGAGAAG TGAAAAACAG GAAAGGAACT TTAATCAGCA GAACTATACC AGGAAGAGAA
  GGGNGATGAT GCTGTCAGCC CTGGCCTTGG AGGCCCTCAT AGGAGNTCCC AGCTTACACA
  R
  GACTGGGGAC AGAGGCTGGA GCAAGAAGCA CGTGCTAATC AGCTTTGGCC AAAGTGTGGT
  CTGGTTGATC ATTATCCTAG GATTGGTCTG GCAGGCCTTG TTCAGTTGCC GGNGGTTAGG
  GGGTAGTTTT GATCCTTGTC ACAGATGTTT ATCCAGGGGC TCTGTTGTTC CTGGAATCCA
  CCAGACTGTA ATGACTCCGT GCAAAGGGAA CAGGTGCAAA CTGGAGTCAT CATACCAAGC
  TTTTGTTCTG                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8629788	WI_WGS_4_41261202	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6224086					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:41494545 () rs orientation: forward

Symbol	Name	Function Class
Myorg	myogenesis regulating glycosidase (putative)	1059 bp downstream
Tssr41339	transcription start site region 41339	1774 bp downstream