rs6224348 SNP Detail

Summary

• ID
  rs6224348
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:12011550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCTTTTCT GCTCCTGCAC
  CTTGGTGTGG GACAAAAAAA TGGGGTCCTG CATCCACTTT TGGCTAGGGC TGCTGGGCGA
  GGCAGACTGG GGAAGTTTGA CTGCTCGGAC CCCAGGAAAC TGCCAGGCAG GTATTGGACT
  GTGAGAAGCC ACAGGACCCG CCCCCCCCCC CCCCCCGCTC CGGGGTGGGG AAGGAAGGGC
  R
  CAGTCTGGGG TCCCCATGGA ACTGCAGGAG TTGGGCTCCA ACTCTCACTC AGGCACCACA
  GATAACACTG GGCACCTCGA GGACCCAGGA GGCGTGGCCA AACACCTTCT GTCCTTTAAG
  GCCACTAGGG TCCCGCGGGA CCAGGCTACT TGTGCACAGC TCACCACCCC ACACCATGGT
  ATAGTAAATT CTCCCATGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8630051	WI_WGS_2_12111456	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6224348					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:12011550 () rs orientation: forward

Symbol	Name	Function Class
Rr551866	regulatory region 551866	869 bp proximal