rs6227611 SNP Detail

Summary

• ID
  rs6227611
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:47571086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ACTTACCACC
  CAGATGTTAG AACGTGCTTG GAGTTCTGCA TTTACCCGGA AGCCACCAAA ATCGGAATCT
  ATTTCCAGTC CGCCAGTCTT GGCCAACTCA ACATTGGGCT CTAGGCCCAC AGCTGTCACT
  ATGTGGTCAG TTTCTACCTG AAAGGAAAAA GGGATTTGTT TGATGAGCTC CTTCACCTCA
  CAACCTTATT ATATCACAGC ATTTAAAATC AGACTTTCAA AAAGGTAATG GCCTCAGGAG
  Y
  CCAATAACAC AGGCTTTTCC TATCAAGGGT CTGGGGGGTA GCTCAGCTCA GTGGTAGAAT
  GCTTTTGTAG CATGCAAGGA ACTGCTGTTT AAAACAAAGA GAAAAGAAAA ATAAAGAAAA
  CTAAATAAAT AAAGTATTAG ACCTTCAAAA ATAATCATAG GTTAACTTAC TTCCAGTAAA
  GAGACTTTAA GCTCTACTTT TATAAGNACC CCCAAGCCCC ATTAATATTC CATAGCACCT
  GGACAGAAAT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8633320	WI_WGS_X_34129090	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6227611					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:47571086 () rs orientation: forward

Symbol	Name	Function Class
Aifm1	apoptosis-inducing factor, mitochondrion-associated 1	within coordinates