rs6228712 SNP Detail

Summary

• ID
  rs6228712
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:47571293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAGGCTT TTCCTATCAA
  GGGTCTGGGG GGTAGCTCAG CTCAGTGGTA GAATGCTTTT GTAGCATGCA AGGAACTGCT
  GTTTAAAACA AAGAGAAAAG AAAAATAAAG AAAACTAAAT AAATAAAGTA TTAGACCTTC
  AAAAATAATC ATAGGTTAAC TTACTTCCAG TAAAGAGACT TTAAGCTCTA CTTTTATAAG
  W
  ACCCCCAAGC CCCATTAATA TTCCATAGCA CCTGGACAGA AATCTGCTAT CCTAGGAAGG
  ACTAAAGACA ACACAGTTTA GAAGAGGCCA AGGGAGAACA GTTTACATTG TGTCCACTCT
  AGTTCTCATT ATTCTATTTT GACAGAGGGC TGGTTAACTC AGAGAACTGG CAGATGTTAA
  TGGTGGCTGC TAAGGAAACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8634424	WI_WGS_X_34129297	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6228712					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:47571293 () rs orientation: forward

Symbol	Name	Function Class
Aifm1	apoptosis-inducing factor, mitochondrion-associated 1	within coordinates