rs6231834 SNP Detail

Summary

• ID
  rs6231834
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:64204687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTAGAGA ATTCATTTTT
  GTTTATTTTG TTGACTTCTT TTGCTGTATT ATTGTCTTTT GCGACAGGGT CTTATTATGT
  GTTGAGACAT GGTCCAAGGA TGAAGCTGTG TGAGATTTCT GAGAGCTTGT GAGAAAGCTT
  CAAGAAAACA GAATCTTGCG CCTTCTGTGC CTTCTGAACA AGGGTTTGTT CTAGGAATAT
  R
  CTTTTGTGCC CCTCCCAGGT ATAATAAATA GAAGTGGGTT TGCTGTGGAA TACCCGTTGC
  TACTACTTGT GTTGTTCAAA AAATGTTTCC ACCCACAAGT TGTCCCTGTG GCCATATATA
  GTTTGAACTC ACGTGAACTT TGCTCATATG ACCTTGATAA CCCTCAGAAT ATAAATTGCC
  TGATGTTCTG AATAAAGTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C57BL/6J	LG/J	SM/J
ss8637553	WI_WGS_13_62881421	WI	MOUSE	f	SNP	A	G
ss324378682	CHEV_13_64158181	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C57BL/6J	LG/J	SM/J
rs6231834					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:64204687 () rs orientation: forward

Symbol	Name	Function Class
Gm30999	predicted gene, 30999	within coordinates
Hsd17b3	hydroxysteroid (17-beta) dehydrogenase 3	1393 bp downstream
Rr273309	regulatory region 273309	714 bp proximal
Rr388579	regulatory region 388579	1835 bp downstream