rs6234617 SNP Detail

Summary

• ID
  rs6234617
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97551347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGG CTACAGTTTT AAAGGGTTTC
  R
  GTCTATTATG GTGGTGAAGA CACGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss8640349	WI_WGS_13_94760507	WI	MOUSE	f	SNP	G			A
ss145035217	ENSMUSSNP157036	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss324496763	CHEV_13_98184794	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs6234617					SNP	G	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97551347 () rs orientation: forward

Symbol	Name	Function Class
Rr274314	regulatory region 274314	1054 bp proximal
Rr285518	regulatory region 285518	527 bp proximal