rs6240182 SNP Detail

Summary

• ID
  rs6240182
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183831241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGCTAGA AACTGAACTT
  GGGTTCTGGA GAGAGCAGTA TGTGCTCCAA ACCACTGAGC TATCTCTCTA GCCTCATGGT
  TTTGATTCTA ATTTCCTTGC TTGCTCCACC CCCTCCCTCA TCACTTACAA GGAAAACAAG
  AACACATGTG GCACAGCACC CAGGATCTCA CATGACTTGT AAACTAGTAA CCCCAGTTCT
  R
  CAGAAAGTTA GGGGTCCCCA CAGTAGCTTC TTGTGGATTC TGTACAGGCT GTAGATGAGT
  TAAAAGAGTT TCACCCATGC TCCCTAGAAC AATTACAGCC CAGTGTCCTA AAAGGGATTT
  TTATACCCAT CGGCAAAAGT TAGAAGTAAT AAAGCCATCG TGAAGAAAAA TATAAAGTTG
  CTTGTGTCCC TGGAGGGACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8645929	WI_WGS_1_185197266	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6240182					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183831241 () rs orientation: forward

Symbol	Name	Function Class
Rr425178	regulatory region 425178	1438 bp proximal