rs6240696 SNP Detail

Summary

• ID
  rs6240696
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183831330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTCCTTG CTTGCTCCAC
  CCCCTCCCTC ATCACTTACA AGGAAAACAA GAACACATGT GGCACAGCAC CCAGGATCTC
  ACATGACTTG TAAACTAGTA ACCCCAGTTC TGCAGAAAGT TAGGGGTCCC CACAGTAGCT
  TCTTGTGGAT TCTGTACAGG CTGTAGATGA GTTAAAAGAG TTTCACCCAT GCTCCCTAGA
  R
  CAATTACAGC CCAGTGTCCT AAAAGGGATT TTTATACCCA TCGGCAAAAG TTAGAAGTAA
  TAAAGCCATC GTGAAGAAAA ATATAAAGTT GCTTGTGTCC CTGGAGGGAC ATTGACTTGA
  ATCATAGCCA GCATTGAATT AGTTCCTGGG TTTCTTTTAC AAATCTTAGG TGTTCTTGAG
  AGAGAGAGAG AGAGAGAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8646445	WI_WGS_1_185197355	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6240696					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183831330 () rs orientation: forward

Symbol	Name	Function Class
Rr425178	regulatory region 425178	1349 bp proximal