rs6241898 SNP Detail

Summary

• ID
  rs6241898
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100182450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TTTGACAGAC
  AAAACACTCC GNGCAGTGCT TCCNACTGGC TGTTGTGCAC ACCGCCATGG CTTTAGCTGC
  TCCACAATAA TCCCCAAACT CTGAATTTGC AACACCCCAG GGTATTTCTA GTCACTATAA
  GGGATTTTGA AAGAGTCTTA AAATTTCTCA AAAACAAATT AGTGTCAGTG AACTTTAAGA
  AGTAAAGAGG CTCTACACCA GGCCTTCCAG GGTCACAGAA AAGCAGTATC CTGAAATCCA
  K
  CCAGGAGAAG CCCCTCCAGT GGGCAGGAGG AAGAGCGAGG CGGGGTCTCT CCCTGCTGCT
  TTACTTAGGA ATCTCCCACA AAACAGATGG ATCTGCCCTT CCTCCAGTTG TGGGGATACT
  GAGCCTGGTG TACAGTGTAC GAGACAACAA GACAATCCAG AGGCTGTAAA GATTTCTGAG
  AGGACTGAAT GGGAGTGGAG CTGGTTTTGT CAGGAGAAAG GAAAGCTGGT AAGCAAGACT
  GTCATATTCT                                                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8647649	WI_WGS_9_100831132	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6241898					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100182450 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates