rs6247599 SNP Detail

Summary

• ID
  rs6247599
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:107911201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCAGATGT TATTTTTAAA
  AATGAAGTAC AGCAACAGTG GCTATCTACC CCTGCCCCCT CCAGACAGTG TAGCTGATGG
  CTCCTCCTGT CTCTAAGTCC CGCCTCTTTT CCCAAAATAC TTCACAAAGT GTGCATCCCT
  TTGATTTCTT AGGAATCTAA GAGCTGAAGA AGGACTGACT TCAGAGTAAT CTCTTTTACA
  R
  AGAGAACCAA ACACTACTTA CAGGAGAGCA GTTTAAAAAG GGACCAACAT GCGCTCTCTG
  GTCTGACACT GGTTTCTAAC CATCTTCCAC CCTGGCTGTC TTTACCAGTG AAAGATGTGT
  GTGTGTGCTT ACCTTCTATA CACTTCTCTC CGGTCCGTGG GGCTTCACAA AGGCCTTTCT
  GCTGTTTTTC TTTACCGATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8653361	WI_WGS_8_107022353	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6247599					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:107911201 () rs orientation: forward

Symbol	Name	Function Class
Cyb5b	cytochrome b5 type B	within coordinates
Rr669364	regulatory region 669364	1712 bp distal
Tssr79292	transcription start site region 79292	1466 bp downstream