rs6251285 SNP Detail

Summary

• ID
  rs6251285
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84010809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCCCCCT TTTCCGCCCC
  TGGCTGCAGA TTCACCTAAC ACCATGCTGG AGAAAATGGA GGAATACTTA TTCTTTTAAT
  GAGATACTAT ATTTTCCTTC CCAGAATCCT TTGTCTTGTG TTCTTGCTAG GGAGCCACCA
  TGAGATTCTG TGAGCCTTGG TGACTTCTTT TTCCTCTTTC TGCCTCAGAT AGGGTGTGAG
  K
  ATACTTCCTC TGGCATTTTG AGCTTTTTTC GGCTCTTTCT CTGAAGCCAC TCCCCTTTTG
  ACGTGCGGCT ATTTGCAACA CATCTGGGCC TAGCTCACAA GCACATAGCT TTTCATCTTC
  ATCTTCCTCC TCCAGGCAGC CACTGAGATT TACAGTTTGC CTGCCCTGGG GTTTCACTTT
  CAAATACGAA TAAAATTTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8657057	WI_WGS_15_84926447	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6251285					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84010809 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	670 bp upstream
Rr304809	regulatory region 304809	392 bp proximal
Rr310902	regulatory region 310902	within coordinates
Tssr132442	transcription start site region 132442	692 bp upstream
Tssr132443	transcription start site region 132443	715 bp upstream
Tssr132444	transcription start site region 132444	749 bp upstream