rs6251323 SNP Detail

Summary

• ID
  rs6251323
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84010831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCAGATT CACCTAACAC
  CATGCTGGAG AAAATGGAGG AATACTTATT CTTTTAATGA GATACTATAT TTTCCTTCCC
  AGAATCCTTT GTCTTGTGTT CTTGCTAGGG AGCCACCATG AGATTCTGTG AGCCTTGGTG
  ACTTCTTTTT CCTCTTTCTG CCTCAGATAG GGTGTGAGTA TACTTCCTCT GGCATTTTGA
  K
  CTTTTTTCGG CTCTTTCTCT GAAGCCACTC CCCTTTTGAC GTGCGGCTAT TTGCAACACA
  TCTGGGCCTA GCTCACAAGC ACATAGCTTT TCATCTTCAT CTTCCTCCTC CAGGCAGCCA
  CTGAGATTTA CAGTTTGCCT GCCCTGGGGT TTCACTTTCA AATACGAATA AAATTTCTCC
  TCAAGACTCC TTTTGAACAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8657095	WI_WGS_15_84926469	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6251323					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84010831 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	648 bp upstream
Rr304809	regulatory region 304809	370 bp proximal
Rr310902	regulatory region 310902	within coordinates
Tssr132442	transcription start site region 132442	670 bp upstream
Tssr132443	transcription start site region 132443	693 bp upstream
Tssr132444	transcription start site region 132444	727 bp upstream