rs6251335 SNP Detail

Summary

• ID
  rs6251335
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84010839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACCTAAC ACCATGCTGG
  AGAAAATGGA GGAATACTTA TTCTTTTAAT GAGATACTAT ATTTTCCTTC CCAGAATCCT
  TTGTCTTGTG TTCTTGCTAG GGAGCCACCA TGAGATTCTG TGAGCCTTGG TGACTTCTTT
  TTCCTCTTTC TGCCTCAGAT AGGGTGTGAG TATACTTCCT CTGGCATTTT GAGCTTTTTT
  Y
  GGCTCTTTCT CTGAAGCCAC TCCCCTTTTG ACGTGCGGCT ATTTGCAACA CATCTGGGCC
  TAGCTCACAA GCACATAGCT TTTCATCTTC ATCTTCCTCC TCCAGGCAGC CACTGAGATT
  TACAGTTTGC CTGCCCTGGG GTTTCACTTT CAAATACGAA TAAAATTTCT CCTCAAGACT
  CCTTTTGAAC ATTTAAATTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8657107	WI_WGS_15_84926477	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6251335					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84010839 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	640 bp upstream
Tssr132442	transcription start site region 132442	662 bp upstream
Tssr132443	transcription start site region 132443	685 bp upstream
Tssr132444	transcription start site region 132444	719 bp upstream