rs6251733 SNP Detail

Summary

• ID
  rs6251733
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84010881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTAATGA GATACTATAT
  TTTCCTTCCC AGAATCCTTT GTCTTGTGTT CTTGCTAGGG AGCCACCATG AGATTCTGTG
  AGCCTTGGTG ACTTCTTTTT CCTCTTTCTG CCTCAGATAG GGTGTGAGTA TACTTCCTCT
  GGCATTTTGA GCTTTTTTCG GCTCTTTCTC TGAAGCCACT CCCCTTTTGA CGTGCGGCTA
  Y
  TTGCAACACA TCTGGGCCTA GCTCACAAGC ACATAGCTTT TCATCTTCAT CTTCCTCCTC
  CAGGCAGCCA CTGAGATTTA CAGTTTGCCT GCCCTGGGGT TTCACTTTCA AATACGAATA
  AAATTTCTCC TCAAGACTCC TTTTGAACAT TTAAATTCAT CATGATTTTG AAGAGGAAAA
  GATGATCACC TTAGCCGATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8657507	WI_WGS_15_84926519	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6251733					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84010881 () rs orientation: forward

Symbol	Name	Function Class
Gm33432	predicted gene, 33432	598 bp upstream
Tssr132442	transcription start site region 132442	620 bp upstream
Tssr132443	transcription start site region 132443	643 bp upstream
Tssr132444	transcription start site region 132444	677 bp upstream