rs6252030 SNP Detail

Summary

• ID
  rs6252030
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45181147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTATATAAG AAATGAAGGA
  AAGAGGTTTG TTTGACTCAT GACGTTTGGT ATTATACATC TAGAAAGCAC AGCAGTGGGT
  GTATGCATTG CACACAGGAA TGGAAGGGGG AATTTCCAAA TATGTAAGGC CATAGTGTGT
  TTGGAAAGAT GATCTACTTT TTAATGTCTG GATTGCTGAG GTAGCACTAG TCTGTTCGTG
  W
  AGGAGCACTC ATAACCTCAT TATCTTCTAG TAGGCTCAGA CTCTGAAATG GCTAACTCAA
  TCTCTCCATA TTTGGGAACC AACAAACCAG CAGATGAAAC TTTTGGTGAT AGATTACATT
  CAAACCATGG CATTTGCATT AGGTAAGTTT CTTAGGACTT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGAGAGAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8657806	WI_WGS_16_45407356	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6252030					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45181147 () rs orientation: forward

Symbol	Name	Function Class
Gm30636	predicted gene, 30636	within coordinates
Gm30760	predicted gene, 30760	1641 bp downstream