rs6253018 SNP Detail

Summary

• ID
  rs6253018
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:45181337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TTGGAAAGAT
  GATCTACTTT TTAATGTCTG GATTGCTGAG GTAGCACTAG TCTGTTCGTG NAGGAGCACT
  CATAANCTCA TTATCTTCTA GTAGGCTCAG ACTCTGAAAT GGCTAACTCA ATCTCTCCAT
  ANTTGGGAAC CAACAAACCA GCAGATGAAA CTTTTGGTGN TAGATTACAT TCAAACCATG
  GCATTTGCAT TAGGTAAGTT TCTTAGGACT tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
  W
  gtgagagaga gagagagaga gagagagaga gGCTTTACTA GGATGGTTTA TAATCCATAG
  ACTCTGAGTA ATCAAACAAC AGTCATTTAA TGCTGGAGGG GCAGAGAAGA TGATGACTGC
  TCATTTCACA ATGAAAGATA CCAAACANTT TGGAGGTGGG TCCTCCATAT AATCCTTCTT
  GGAAATGGCC TCACAGCTGC ATGCAGAGGT GTGCCTCTCA GTGGATTCTC NATAAAGGTT
  AATCATCCTG                                                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8658797	WI_WGS_16_45407546	WI	MOUSE	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6253018					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:45181337 () rs orientation: forward

Symbol	Name	Function Class
Gm30636	predicted gene, 30636	within coordinates
Gm30760	predicted gene, 30760	1451 bp downstream