rs6254871 SNP Detail

Summary

• ID
  rs6254871
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138282389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAG ATCTGCATTG GCCAGAGGCC
  M
  TCTGTGCAGC CAGGGAGACC AGACC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8660652	WI_WGS_3_139078569	WI	MOUSE	f	SNP		C	A
ss135954579	ENSMUSSNP5578964	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6254871					SNP	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138282389 () rs orientation: forward

Symbol	Name	Function Class
Gm29762	predicted gene, 29762	within coordinates