rs6255201 SNP Detail

Summary

• ID
  rs6255201
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156604922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGG TTTCATGCAA GCCATTGTCA
  Y
  CTAGGCTACC TTTCCTGCCT TGATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J
ss8660982	WI_WGS_1_157892963	WI	MOUSE	f	SNP			T	C
ss45116931	mCV23085577	ABI	CRAMUS_MOUSE	f	SNP		T		C	T
ss145804822	ENSMUSSNP2182583	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J
rs6255201					SNP	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156604922 () rs orientation: forward

Symbol	Name	Function Class
Gm71086	predicted gene, 71086	within coordinates
Rr421253	regulatory region 421253	968 bp distal
Rr421254	regulatory region 421254	567 bp proximal
Rr421255	regulatory region 421255	1563 bp proximal