rs6256627 SNP Detail

Summary

• ID
  rs6256627
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138282715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAA AGTAAAAAAT TCAAGATGGC
  Y
  TGTATGTAGT GCTTTGGGGT CCATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8662409	WI_WGS_3_139078895	WI	MOUSE	f	SNP			T	C
ss45516001	mCV22628368	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss135954591	ENSMUSSNP3072871	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss320980415	CHEV_3_138239918	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6256627					SNP	C	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138282715 () rs orientation: forward

Symbol	Name	Function Class
Gm29762	predicted gene, 29762	within coordinates