rs6256662 SNP Detail

Summary

• ID
  rs6256662
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152385788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTTTAAA CTTGAGGACA
  GTTTATCCTT TAAAAGGAGA CCTCGCAGAC AGGCAAGTGG TCTGTCTATC TTGCAGCTTC
  CAGGAGCACA GAGGTGGGCC ACCTGGAGGA AGCTTTAGAT AAGGAGCAAG GGAGCTGGGA
  TGCTGGGGGC TGGGGTGGGT GGGGTAAAAG CAGACAGTGG CCAGCACTGG GAAGAGATGG
  R
  CATACTGCCT TCCTGGATGG CATCTTCTCA GGCTGCCTTC TTCTGGGCAT GGGACCTCTG
  GTGGCAGTGG TACAGTCCTG CCCTGCATTG GGTCCCTTTC TGGCGCTCTG ACTTGGGTCT
  GGAACACCTT GGGCGTGGAA AGGTAGGCTT TGGGGAGGGA GTGTCCTCAG CCACCCTCTG
  GTGGCTCAGT GGGTTTGCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8662444	WI_WGS_4_147709532	WI	MOUSE	f	SNP				A	G
ss45670452	mCV23461454	ABI	CRAMUS_MOUSE	f	SNP	G	G	A			A
ss148080444	ENSMUSSNP3532317	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A			A
ss321434086	CHEV_4_151675440	CHEVERUD	SCREENING_POP	f	SNP							G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6256662					SNP	G	G	A	A	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152385788 () rs orientation: forward

Symbol	Name	Function Class
Gm70210	predicted gene, 70210	1956 bp downstream
Icmt	isoprenylcysteine carboxyl methyltransferase	within coordinates
Rr605836	regulatory region 605836	1900 bp proximal