rs6257035 SNP Detail

Summary

• ID
  rs6257035
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138282726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AAAGCAAAAT
  CTTTACAAAA GGGGGTTCTC CTCTCCCCAA AACCAAAGTG TCACATAAGC TCAAAATAAA
  ATATAAAGTA AAAATGCTGC ATTAGAAAAG TTTGCAATGT TAAAAGCCTT TCCATTAGGG
  AGACTGGCCC TAAAGTGTCA AACATCCAGT AAAAGGCCAT GGAAGTACGG CCTATAACCT
  AAAATACTAT GTAAGTGTTG CATTGAAAAA GTAAAAAATT CAAGATGGCN TGTATGTAGT
  S
  CTTTGGGGTC CATGTGGAGG CAGAGGGGTG GGGACCCTGA TGTGGCCACA CATCTGAGCA
  TGGCCTTAAG CTTCAACTCA GGGGGATTAA TTCCAGGGCC ATAAGCACCC TAGATTCACA
  ACCAATAGCC ACCTGTGGCT CACTTTCCAT ATGGATGGTG TGGCTAGGAA CATGCACACT
  TCTCTTTGGG GTCACCGAGC TTGGCATTAA GTGCTGTAGG TTGGGAATGT GGGGACGGTG
  CTACCCAAGC                                                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8662818	WI_WGS_3_139078906	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6257035					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138282726 () rs orientation: forward

Symbol	Name	Function Class
Gm29762	predicted gene, 29762	within coordinates