rs6262696 SNP Detail

Summary

• ID
  rs6262696
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44105714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ATGTGGGAAT
  AATACACACT GAGGATTGGA CAGGGCATCC CTGAAGCAAA GTTAAGCCTA GTGCCTCATG
  GTGCAAAAGT GGGCACAAGG TGGCAGCCAC AGTGGTCCCC TAACTCACCA TAGAACGCCA
  TCCAAGGAAC AACTTGGACC AATTTAAACC ACAAACTGGT TACTTTGAAT CTCTTAAGTG
  AAAAGATTGA GGTAGACATA AGAGCGTGGC ATATCTCCTC TAAGANCTTG TTCATCCACA
  M
  AGTCCCACTA TGGGGGAAGG GCTTTCATCA ACCGTGAGTG ACTTAATACA GGATTGCATA
  NGTCTACATA TGGTGCCCCC TTATCTGCAG AGATTATGTT CTAAGACCCC ACCCCCANCC
  CCCGTGGGCC CTGAAACCAC AGAGGATAGA AAACCATACA TACNCTGTAT CCTTTCTATC
  CAGACACCTT AAATTAAAGG TTAGGANGAG TTCACAGGAA GCAGCAGAAT GTTTAAAAAC
  CCTGACACNG                                                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8668497	WI_WGS_13_43539139	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6262696					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44105714 () rs orientation: forward

Symbol	Name	Function Class
Gm2233	predicted gene 2233	within coordinates