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rs6265430 SNP Detail
Summary
  • ID
    rs6265430
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr5:146289643 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCTGATCTTA TGAGGCACAC
    AATGTCATTT GAGCTTCAGT CATGATGTAC CATGCTTCCA CAAGCTCAAA CGATAACCAG
    TAGTAACCAG CTAGAAATTT GCATCCTGGC CCTTTCTCTT GATGCCAGGA GGATGCCAGC
    CAGCCACGTG ATCAGGGTAA AATAAGCCAC ATGACCAGGC TTACAGCATT GTCACACTAG
    K
    ACTTGCAGCG TGCTAGGAGA AGTCGCAATT TACAGTACTT TCAACTTATG ATGAGTCTGC
    AGGGGTGTCT CTCACCCTAA ATCAAGCTGC AGGTACAGTT AGCCAATCAG GTAGCCAGCG
    CATGAGGTAA GAAGTGATGT CCCCTGCTAT ACCTATGCCA TCTAACAGAA AGATTTATTA
    GCATTATAGA GATTTCTGGG                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
C57BL/6J
CZECHII/EiJ
ss8671235 WI_WGS_5_145303365 WI MOUSE f SNP G T
SNP Consensus Information
SNP Consensus Type
C57BL/6J
CZECHII/EiJ
rs6265430 SNP G T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr5:146289643 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm38747 predicted gene, 38747 700 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory