rs6265470 SNP Detail

Summary

• ID
  rs6265470
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:146289668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTGAGCT TCAGTCATGA
  TGTACCATGC TTCCACAAGC TCAAACGATA ACCAGTAGTA ACCAGCTAGA AATTTGCATC
  CTGGCCCTTT CTCTTGATGC CAGGAGGATG CCAGCCAGCC ACGTGATCAG GGTAAAATAA
  GCCACATGAC CAGGCTTACA GCATTGTCAC ACTAGGACTT GCAGCGTGCT AGGAGAAGTC
  K
  CAATTTACAG TACTTTCAAC TTATGATGAG TCTGCAGGGG TGTCTCTCAC CCTAAATCAA
  GCTGCAGGTA CAGTTAGCCA ATCAGGTAGC CAGCGCATGA GGTAAGAAGT GATGTCCCCT
  GCTATACCTA TGCCATCTAA CAGAAAGATT TATTAGCATT ATAGAGATTT CTGGGACACT
  TTGTGCATTG CAATGTCCAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8671275	WI_WGS_5_145303390	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6265470					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:146289668 () rs orientation: forward

Symbol	Name	Function Class
Gm38747	predicted gene, 38747	675 bp upstream