rs6270528 SNP Detail

Summary

• ID
  rs6270528
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:92598914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTGCAAAG ATTTCAAGCC
  ACAGGATTCC CTCTTGTCCA AATAAGGTCA GTCTTTGGTT CTCTCAGGCT GCCAAGTGAT
  TGGATGAGCA TCACCAGTAG GATGGTAGGC ATGCCACTTA GTCACCAGGT GAGCTCTCCT
  AAAACCTCCC TCAAAGGGAC CTCCAGAATG AGACCTGACC AAATATTTCT GCATCACACC
  Y
  GGGCAGAGTG GATTCATGAA ATAAACTATC ATGGCAGACA AGCATGCTGA GCTGAAAACT
  GAGGCAGATG AGAATTGGTT CTCATCTCTC GGAGAGGCCA AGTGACTTCC TGAAAGTCAC
  CAAGCAAATT GGTAACCGGG AGGACTGGTG GACAGAGGTT GGGCTGGCAG TGAGGTAAAC
  CTGGGAGGAT CTAACTCACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8676347	WI_WGS_2_93747467	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6270528					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:92598914 () rs orientation: forward

Symbol	Name	Function Class
Rr560991	regulatory region 560991	111 bp distal