rs6270576 SNP Detail

Summary

• ID
  rs6270576
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:92598943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTTGTCC AAATAAGGTC
  AGTCTTTGGT TCTCTCAGGC TGCCAAGTGA TTGGATGAGC ATCACCAGTA GGATGGTAGG
  CATGCCACTT AGTCACCAGG TGAGCTCTCC TAAAACCTCC CTCAAAGGGA CCTCCAGAAT
  GAGACCTGAC CAAATATTTC TGCATCACAC CCGGGCAGAG TGGATTCATG AAATAAACTA
  Y
  CATGGCAGAC AAGCATGCTG AGCTGAAAAC TGAGGCAGAT GAGAATTGGT TCTCATCTCT
  CGGAGAGGCC AAGTGACTTC CTGAAAGTCA CCAAGCAAAT TGGTAACCGG GAGGACTGGT
  GGACAGAGGT TGGGCTGGCA GTGAGGTAAA CCTGGGAGGA TCTAACTCAC TCACATTTCA
  TCTGAACTCT TCTAAAGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8676395	WI_WGS_2_93747496	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6270576					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:92598943 () rs orientation: forward

Symbol	Name	Function Class
Rr560991	regulatory region 560991	140 bp distal