rs6272711 SNP Detail

Summary

• ID
  rs6272711
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:92599298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AACCGGGAGG
  ACTGGTGGAC AGAGGTTGGG CTGGCAGTGA GGTAAACCTG GGAGGATCTA ACTCACTCAC
  ATTTCATCTG AACTCTTCTA AAGCTGGAGA TGAGGAGAGA AATGTCCACT CTGAGTTTGT
  ATCCACAAGG CAGAGACAGG ACCACNGCGG AAGCATGGTT GCCTTGTTCT GGAAAGCACA
  TCTGTAACTT TAGTTGTTGC TGCACTGCTC CAAAGTGGCC ACCACAGCCC GTTTTGTGCA
  Y
  GAGGAGACTG GGGTGACGAA TAGGAGGAAA CTTGCTGAGG CTTCAGAGTG AGCAGGTCGA
  GGGGAAGTCT CTGACCTGCA TCTGCTGGAC TTGCCACCTC AGCACTTGCT TCTACAAAGT
  ACAAGCCAGT CCCCAGGGAG TGTGAGCAGG CCTGTGGGGT ACACACCAGA CCTTCCAGAC
  CTTACACGAT ACCTTGTCTG GTTTTCTCAG CAACCCCTGC ACCAAAGACA CAGGAGCCAA
  GATGAGGGAG                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8678535	WI_WGS_2_93747851	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6272711					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:92599298 () rs orientation: forward

Symbol	Name	Function Class
Rr560991	regulatory region 560991	495 bp distal