rs6276048 SNP Detail

Summary

• ID
  rs6276048
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:166262798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ATTATGCTGT
  CTGTTCTCAG AAATGGTAAA GGTtctctct ctctctctct ctctctcAAG TTTGTGTTTG
  TGTGTATTGC ATACACTATA TGCATATGTT TGTATGTGAC CATACTCACA Atgagcatgt
  acacagaagc cagacatnaa tgccttgtat caatcactct cntttttcat catctagttt
  tgaatcaggg tctatcactg aacctggagc ttactgattc agttaggctt gctgactggt
  S
  agctgctgag atccacttgt ccctgcctgc ccagtgttgg gattagagtt gcacaccagc
  agacatggat tttcattggg ggtactaagg attcaaaatt caggccttca tgtttgtcca
  acaagtgtct catctaggga gtcatctcct cagtccTGCC TATTTTATAT TTTAGTGGCC
  TGTATTATCA CTGTAAGCAC GGTTATTCAA CATTCCAAAT GGAGCACTAG TTGATGTAGG
  CCCCAGGTGT                                                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8681875	WI_WGS_X_144666816	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6276048					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:166262798 () rs orientation: forward

Symbol	Name	Function Class
Frmpd4	FERM and PDZ domain containing 4	within coordinates