rs6278318 SNP Detail

Summary

• ID
  rs6278318
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:45009831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAAGCGAT CTTAAGTAAG
  AGTCAAGAGT AAAAGGAGAC AAACTCACAG ATTTGGAGAC AAGGAGTTTG GCTGTCACAG
  TGCTTTGCTT TGAGACCACT CAGAATGATA ACCAACATTC CCGTCGGTTA TTGTGGCCCG
  AGCTTTAGAT TTGCTCCAGC ATCTACAGTG GGGACGAAAG TCAGTTTATA AACTGGAAAA
  Y
  GAATTCCCCT ACTCTCTTAA ATGTCCACAA GGCCAGAGTT TCTTTTTGAT GCAAAGCTGA
  AAAATCAGTG CAATTGCGGG ATGGGAAGTC CTTCAATATT TAGTCAGAAC ACTAAAGGCT
  TTTTGTTGTC TTTTAAGACC TTTAGGAGCA TTTATAATTA TTTATCATTC TTAAAGGGTC
  CTTTAATTGT CTGCTTTCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8684157	WI_WGS_2_45591750	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6278318					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:45009831 () rs orientation: forward

Symbol	Name	Function Class
Gm28643	predicted gene 28643	within coordinates
Rr556445	regulatory region 556445	1958 bp distal