rs6278319 SNP Detail

Summary

• ID
  rs6278319
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:45009832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGCGATC TTAAGTAAGA
  GTCAAGAGTA AAAGGAGACA AACTCACAGA TTTGGAGACA AGGAGTTTGG CTGTCACAGT
  GCTTTGCTTT GAGACCACTC AGAATGATAA CCAACATTCC CGTCGGTTAT TGTGGCCCGA
  GCTTTAGATT TGCTCCAGCA TCTACAGTGG GGACGAAAGT CAGTTTATAA ACTGGAAAAT
  R
  AATTCCCCTA CTCTCTTAAA TGTCCACAAG GCCAGAGTTT CTTTTTGATG CAAAGCTGAA
  AAATCAGTGC AATTGCGGGA TGGGAAGTCC TTCAATATTT AGTCAGAACA CTAAAGGCTT
  TTTGTTGTCT TTTAAGACCT TTAGGAGCAT TTATAATTAT TTATCATTCT TAAAGGGTCC
  TTTAATTGTC TGCTTTCTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8684158	WI_WGS_2_45591751	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6278319					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:45009832 () rs orientation: forward

Symbol	Name	Function Class
Gm28643	predicted gene 28643	within coordinates
Rr556445	regulatory region 556445	1959 bp distal