rs6281706 SNP Detail

Summary

• ID
  rs6281706
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76393556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ATACTGAGAT
  CTATCTCTAA ATCTCAAAAA AAGTAAAGGC AGGGAATATA TCCTAAATAG CCTAAAATAC
  ATGGTCAGTA TCTGTGCTTC TGTATGATCA AGTCACTCAA GTAACCGAGT GATTGCTGTG
  ATGACTTAAG TGTAAGATAC CATGCAGTTA TGACCCCTAA ACAGCACATT TGTTAACCAC
  CCCAATACAA TCCATTCTAC CACTAGCTAT GTTCTGTTCT TAAAACACAT CATCAGTCTT
  R
  ATCTCAGACG CTAACTCTAA ATCAGAAACT CAGTTACCTT AAAACAGTGC CCNGTAGGGT
  TCTTCACTTG gcctttaaaa gttaccactc tgaaggcngg atgggaagac aacggtgcgt
  tcaagtctag cctgggccaa atagcaagac tatctcaaaa acttacaaac aaaACAATGA
  AGCTACTACT TCAGGTTGGT GTGGTATCTG TGTGTGTGCT GTTTTGTTTG TTTGAGACAG
  GGTCTAACTA                                                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8687564	WI_WGS_12_71019892	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6281706					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76393556 () rs orientation: forward

Symbol	Name	Function Class
A430103D13Rik	RIKEN cDNA A430103D13 gene	1401 bp upstream
Rr468143	regulatory region 468143	582 bp distal
Rr468144	regulatory region 468144	817 bp distal
Zbtb25	zinc finger and BTB domain containing 25	mRNA-UTR