rs6282589 SNP Detail

Summary

• ID
  rs6282589
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191569339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGG ACCGGGCAGT ATTGTCTGGA
  M
  ATCTTGTTAA AATATAGATT CAATT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
ss8688452	WI_WGS_1_193216903	WI	MOUSE	f	SNP			A	C
ss44948649	mCV23985465	ABI	CRAMUS_MOUSE	f	SNP	C	C	A		C
ss146511003	ENSMUSSNP3514009	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320196170	CHEV_1_193661106	CHEVERUD	SCREENING_POP	f	SNP						C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	LG/J	SM/J
rs6282589					SNP	C	C	A	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191569339 () rs orientation: forward

Symbol	Name	Function Class
Rr426232	regulatory region 426232	1928 bp distal
Rr426234	regulatory region 426234	524 bp proximal
Rr426235	regulatory region 426235	1602 bp proximal