rs6284701 SNP Detail

Summary

• ID
  rs6284701
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:71853982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG GAGTATTATT AGACATTTTG
  R
  ATGTTATGAT AATGGAGAGG TTGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8690574	WI_WGS_2_72849943	WI	MOUSE	f	SNP			A	G
ss146754758	ENSMUSSNP7109503	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6284701					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:71853982 () rs orientation: forward

Symbol	Name	Function Class
Rapgef4	Rap guanine nucleotide exchange factor (GEF) 4	within coordinates
Rr44434	regulatory region 44434	1382 bp distal
Rr54770	regulatory region 54770	1417 bp distal
Rr54771	regulatory region 54771	191 bp proximal
Rr373343	regulatory region 373343	1751 bp upstream