rs6287519 SNP Detail

Summary

• ID
  rs6287519
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37916312 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATTATCTCC CTGGCTCGAA GCATTCCTCA GTTGCCTGAG
  TTCTTTCTGT AGGTTTGGGG CCTAGGGGTC TTTTTCTTAT CTACTTTAGC AAGTCTGTTG
  K
  TTTTGTCCCT GTTCAGCTCT TGTTTAGGCA ATCATACTGG TGAGATTTGA TTGGTGTAGC
  TTCTGACATT AGTGTGAGAC ACAGTCTCAC AGCAAACTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss8693403	WI_WGS_3_37747405	WI	MOUSE	f	SNP	T			G
ss134816193	ENSMUSSNP2538321	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		T
ss320713533	CHEV_3_37761085	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs6287519					SNP	T	T	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37916312 () rs orientation: forward

Symbol	Name	Function Class
Rr575577	regulatory region 575577	1569 bp distal