rs6289267 SNP Detail

Summary

• ID
  rs6289267
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:79292846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGATTGCT TTTTTAAAAA
  AAATAATGTC CCAAGTTATT GATAAGTACC TCTTTTTTAT CCTGTGAGCA TATTGGTCCT
  CTGTGAGATG CTCTGAGATT CTACTTCTCC AGTGACACAA CTCACAGTCC TTGGATTTTC
  CTCTTCTGGA CTAGGCAAGT CAGTACTGAA AAATTAAAAC ATAGCAGCGC TGGGAGGGAT
  R
  TGAATGCCAA AATCTATCCC AGAGGGAACT GGCAACAATT ACCATCTTAG TGTGGAGTGA
  AGAGTTGTGA GGGTAGGCAC CCACAGTTGC CTCCTCGGCA CTGGTGCCTT TGAGCTTCAA
  TATACTCACT CCCTCTCCTT CCCCTTGAAA GGTGTCAAGA GGCAGCTCAT AAGAGCTTTG
  CTGAGACCAT GAAGGAGGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8695153	WI_WGS_2_80343174	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6289267					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:79292846 () rs orientation: forward

Symbol	Name	Function Class
Rr559993	regulatory region 559993	386 bp distal