rs6289616 SNP Detail

Summary

• ID
  rs6289616
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:61803582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGCTGGCC ACTAAGTCCC
  AGCAATCCTC CAGTCTCTAC CATCTACCCA GTTATGGGGT TAAAAGCAGC CATGACCAGC
  TTTTTAATGT GAGCTCTGAG CTGGACTTGA GCTTACACTG AGCTTCTGAA TGGTCTTAGA
  TCTGTGACAA CACCTCCTGA ACGTTGCGAT TATGGGTTGT AGCACCTCAT CCTGCTATGG
  R
  TTATTGCTTT TCTAGAAATA ATCTAGAAGT TGCTTCTATA GCAGAAAGCA ACAATGAGTT
  CCTTCCACTC CCGACTTCAG CTCAGGCACC TTCCCTTTCA CTAAGCGTGG TAACACTCCT
  TAGCATGTGT AGACTGTTCA TATGACTGAA AACTTGAAGC AGTCAAGAAA TGACTAGACA
  AAGTATGTGG GTAAGGGGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8695502	WI_WGS_4_59206946	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6289616					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:61803582 () rs orientation: forward

Symbol	Name	Function Class
Rr376581	regulatory region 376581	1532 bp upstream