rs6292687 SNP Detail

Summary

• ID
  rs6292687
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:82047591 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGGCATT CCAAGGATCA
  GCTCAGGTCA CCAGGCTTTG TGACAGACTT CCTCATTCAC CAGGCCATCT TGCTGGCCCT
  CCTTTATTCC TTTAACTTTT AAACAAGAGA TTTATTTTAT GGGTATGAGT GTTTTTCCTG
  CATATAAGTG CACTGCATGT ATGTGTGTGC ACCGTGTCCA TACCTGTTAC CCACAGAGGC
  R
  GGTACATCTT GAGACTGGAG TTGCAGGTTA TGAGCCACCA TGTAGGTGCT GCGAATCAGA
  CCCAGGAAAC ATCCTTTGAA AGAGCAAGCA GCCTGTGTGC TCAGCCACTG AGGCATCTCT
  CCAGCCCTCG TTGGTTGCTG CTGTGTGCCT CAGCCTCTTG AATGCCGGAA TGGTGCACAT
  GGGTCATCAC AGCTGGCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8698582	WI_WGS_15_82922177	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6292687					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82047591 () rs orientation: forward

Symbol	Name	Function Class
Rr404532	regulatory region 404532	436 bp upstream
Rr506421	regulatory region 506421	1721 bp distal
Rr506422	regulatory region 506422	843 bp distal
Rr506423	regulatory region 506423	318 bp proximal
Rr506424	regulatory region 506424	790 bp proximal
Srebf2	sterol regulatory element binding factor 2	Intron