rs6295156 SNP Detail

Summary

• ID
  rs6295156
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:122613449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGCTTCTG TTCTGTCTAA
  TCACCTATGA CATCTCTGAT TTTAGTTTTC AGACAAATTT TCACTCCACT TAAAAGGCCG
  AAAACTTGAA CAACCAATGA ATTTAATCCC CTTTGTGGAG ACTGCAATGG GTTTGCTCAA
  TTTTAAGGTA AGGAAGCCAT CCCTAGCGTG GTCATGTGAG TTAGTATTTT ACTTTGATTT
  Y
  CTAAAGAGAA CTTCTGGTTG GTTTTTTGTT TTTTGTTTTT GTTTTTTTTT TTAATTTGAA
  CATCTACTTA AATTTTTTTT TAAAGAAAGA TTTATAAACC AAGTAAGTTA TTCAAGCCAT
  TTCTTATCTG TCCGGCGACA ATAACAAGGT TGTCAATATC TTAGAAGACA AAGAAACTAG
  TTAAAAAAGA AAAAAGAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8701053	WI_WGS_14_113635954	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6295156					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:122613449 () rs orientation: forward

Symbol	Name	Function Class
2810433H14Rik	RIKEN cDNA 2810433H14 gene	1961 bp upstream
Clybl	citrate lyase beta like	within coordinates
Gm5089	predicted gene 5089	within coordinates
Rr498387	regulatory region 498387	1213 bp distal
Tssr4535	transcription start site region 4535	618 bp downstream
Tssr127328	transcription start site region 127328	805 bp downstream
Tssr127329	transcription start site region 127329	786 bp downstream
Tssr127330	transcription start site region 127330	531 bp downstream
Tssr127331	transcription start site region 127331	222 bp downstream