rs6295862 SNP Detail

Summary

• ID
  rs6295862
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:52582389 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AAATCTGGAA
  ATTTTCTTGA AAGCATCACA GTCCATCAGT CCTTGTGAGA AAATATGACA AATCATAGAA
  CGATAAAGTA GATGCTGTCT TTGNATCAGT GTNTGCTAAG AATAGACACG TCTGCCCCCT
  CTGTGCACCT CTGACGCTTC AGTGCAGTGA GCATGTGAAG GCTACCCTGG GATTTTAGAT
  TCCTAATGCA AGGGGATTTA TGCACTGAGA ATTGATGTCA GACACTTAGG CAAAAATTAA
  Y
  GCACCTGACT CAAAGCAATG NCCAAGGAAG GCAGACGATT TACAGAGGCA GACAGGAGTG
  GCCAGGGTGT GGTAATGAGG TGTGAAGGCT GCTTACCTTT CAANTCTCTT AGTCTGTAAG
  GCTTGAGAAA GTAAGCCATT GTTTTTAGAG ACAGAAACAT AGCATTATCT GCATCAATTC
  CAATCTGGGA CACAGAAATG GTAATTTGGA AAAGAGATTA GGCTTCAATA TTCAGCCCCA
  AAGGAACATG                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8701761	WI_WGS_9_53018373	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6295862					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:52582389 () rs orientation: forward

Symbol	Name	Function Class
AI593442	expressed sequence AI593442	1953 bp downstream