rs6295897 SNP Detail

Summary

• ID
  rs6295897
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:52582410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AGCATCACAG
  TCCATCAGTC CTTGTGAGAA AATATGACAA ATCATAGAAC GATAAAGTAG ATGCTGTCTT
  TGNATCAGTG TNTGCTAAGA ATAGACACGT CTGCCCCCTC TGTGCACCTC TGACGCTTCA
  GTGCAGTGAG CATGTGAAGG CTACCCTGGG ATTTTAGATT CCTAATGCAA GGGGATTTAT
  GCACTGAGAA TTGATGTCAG ACACTTAGGC AAAAATTAAN GCACCTGACT CAAAGCAATG
  K
  CCAAGGAAGG CAGACGATTT ACAGAGGCAG ACAGGAGTGG CCAGGGTGTG GTAATGAGGT
  GTGAAGGCTG CTTACCTTTC AANTCTCTTA GTCTGTAAGG CTTGAGAAAG TAAGCCATTG
  TTTTTAGAGA CAGAAACATA GCATTATCTG CATCAATTCC AATCTGGGAC ACAGAAATGG
  TAATTTGGAA AAGAGATTAG GCTTCAATAT TCAGCCCCAA AGGAACATGT ATATATGTAT
  ATGTGCTTGT                                                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8701796	WI_WGS_9_53018394	WI	MOUSE	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6295897					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:52582410 () rs orientation: forward

Symbol	Name	Function Class
AI593442	expressed sequence AI593442	1932 bp downstream