rs6296456 SNP Detail

Summary

• ID
  rs6296456
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:52582493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT GAAGGCTGCT TACCTTTCAA
  R
  TCTCTTAGTC TGTAAGGCTT GAGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
ss8702356	WI_WGS_9_53018477	WI	MOUSE	f	SNP			A	G
ss46307908	mCV25222795	ABI	CRAMUS_MOUSE	f	SNP	G	A	A		A
ss136500066	ENSMUSSNP4220996	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J
rs6296456					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:52582493 () rs orientation: forward

Symbol	Name	Function Class
AI593442	expressed sequence AI593442	1849 bp downstream