rs6296482 SNP Detail

Summary

• ID
  rs6296482
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121801267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACACAAGC TAGTGTCATC
  TGAAAAAAGG GAACCTCAAC AGAGAAAATG TCTCTATGAG ATCTTCTTGT CAAGTGTTTT
  CTTGATTAGT GGTTGATGGG GGAGGGCCCA GGCCACAGTG AGCTGCCGGG GTATTGGATT
  CTATGAGAAA GAAGGTGGAG CAAGCCATGA GAAGCAAGCC AGGAAGCAGC ATCTTCCATG
  R
  CCCCTGCATA AGCTGCTCCT TCCAGGTTCC TGCCCTGACT CCCCTCAGTG ATGGACTGTT
  AGTTACGAGG GTAAGCTAGA TGAACCCTTC CCCCCAGTGA CCCTAAGACT TGGTCTTCCT
  TCACTTTTGT CATTAGCTGT TCCTGGACAT CTCATCTCCC TGTGGCCATC AAAGACAGGA
  CCTTTCCTTC CAGCATCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8702382	WI_WGS_9_123405384	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6296482					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121801267 () rs orientation: forward

Symbol	Name	Function Class
Gask1a	golgi associated kinase 1A	within coordinates